Annotation

Functional annotation is crucial for interpreting genomic variants. This tool maps your input genomic coordinates (BED format) to a comprehensive set of functional elements in the susScr11 reference genome. It integrates data on candidate cis-Regulatory Elements (cCREs), gene structures, and chromatin interactions (Loops) to provide immediate functional context for your regions of interest.
BED Format: chrom, start, end (Tab-separated; UCSC-style chromosome names）.
... cCRE ID cCRE Tissue Gene P.Gene D.Gene Loop ID Loop Tissue
Input Located cCREs Tissues of cCRE Located Genes Proximal Genes Distal Genes Located Loops Tissues of Loops